Question
You are given a fasta file containing a human mRNA sequence. Find the main CDS of the sequence, return the start position of the CDS (in a 0-based coordinate system, starting from the first base of the given sequence) and the length of the translated protein in the format 4;2.
- Predicted answer
282;351Most likely answer for this question; not uniquely determined from submitted scores.
- Domain
- Genomics
- Question style
- Retrieval
An answer can be uniquely inferred for 54 of 100 questions from submitted scores. Green: correct · Red: incorrect. For questions without a uniquely determined answer: Blue: matches prediction · Orange: differs from prediction. These are inferred answer checks, not official per-question grades.
Galaxy
12/12 terminal item results
UDT = user-defined tool: custom code executed by Galaxy. Route badges summarize analysis tools, excluding uploads and automatic conversions. How usage is counted.
Codex GPT-5.5
3 replicates
Codex GPT-5.5
Replicate 1
Matches predictionStandard tools only
Answer282;351
WorkflowEmboss: Getorf42→Fasta Compute Length
- Total tokens
- 461.9K
- Output
- 4.0K
Codex GPT-5.5
Replicate 2
Matches predictionUDT + standard tools
Answer282;351
WorkflowEmboss: Getorf42→Find main CDS from FASTA→Fasta Compute Length
- Total tokens
- 429.8K
- Output
- 5.6K
Codex GPT-5.5
Replicate 3
Matches predictionStandard tools only
Answer282;351
WorkflowEmboss: Getorf42→Fasta Compute Length
- Total tokens
- 156.3K
- Output
- 3.1K
Codex GPT-5.6 Sol
3 replicates
Codex GPT-5.6 Sol
Replicate 1
Matches predictionStandard tools only
Answer282;351
WorkflowOrfipy→Cshl Fasta Nucleotides Changer→Fasta Compute Length
Codex GPT-5.6 Sol
Replicate 2
Matches predictionStandard tools only
Answer282;351
WorkflowOrfipy→Cshl Fasta Nucleotides Changer→Bedtools Getfastabed→Seqkit Translate→Fasta Compute Length
- Total tokens
- 1.3M
- Output
- 4.7K
Codex GPT-5.6 Sol
Replicate 3
Matches predictionStandard tools only
Answer282;351
WorkflowEmboss: Getorf42→Fasta Compute Length
- Total tokens
- 311.4K
- Output
- 2.2K
Codex + DeepSeek-v4-pro-0813
3 replicates
Codex + DeepSeek-v4-pro-0813
Replicate 1
Matches predictionStandard tools only
Answer282;351
WorkflowEmboss: Getorf42→Fasta Compute Length
- Total tokens
- 297.5K
- Output
- 6.9K
Codex + DeepSeek-v4-pro-0813
Replicate 2
Matches predictionStandard tools only
Answer282;351
WorkflowCshl Fasta Nucleotides Changer→Orfipy→Fasta Compute Length
- Total tokens
- 439.6K
- Output
- 8.4K
Codex + DeepSeek-v4-pro-0813
Replicate 3
Matches predictionStandard tools only
Answer282;351
- Total tokens
- 172.2K
- Output
- 4.5K
Codex GPT-5.6 Luna
3 replicates
Codex GPT-5.6 Luna
Replicate 1
Matches predictionStandard tools only
Answer282;351
WorkflowEmboss: Getorf42→Fasta Compute Length
- Total tokens
- 576.5K
- Output
- 6.0K
Codex GPT-5.6 Luna
Replicate 2
Matches predictionStandard tools only
Answer282;351
WorkflowEmboss: Getorf42→Fasta Compute Length→Emboss: Extractseq35→Orfipy
- Total tokens
- 1.5M
- Output
- 8.9K
Codex GPT-5.6 Luna
Replicate 3
Matches predictionStandard tools only
Answer282;351
WorkflowTransdecoder→Cshl Fasta Nucleotides Changer→Emboss: Getorf42→Fasta Compute Length→Bg Find Subsequences→1 more tools
- Total tokens
- 1.1M
- Output
- 9.6K