Question
From the dataset at 10x_pbmc68k_reduced.h5ad, consider only CD19+ B cells with percent_mito less than 0.04. Among these, compute the number of cells where expression of gene SRM exceeds that of gene MRPS21 by more than 1.0 (n_srm_higher), the number of cells where expression of gene MRPS21 exceeds that of gene SRM by more than 1.0 (n_mrps21_higher), and the number of cells where the difference in expression of the two genes is between 1 and -1 (inclusive) (n_within_range). Round all fractions to two decimal places. Return these numbers as a semicolon-separated string in the format n_srm_higher,n_mrps21_higher,n_within_range. An example of a correctly formatted string is: "50;30;20".
- Inferred answer
37;20;37Uniquely inferred from submitted scores.
- Domain
- Single-cell
- Question style
- Routine Analysis
An answer can be uniquely inferred for 54 of 100 questions from submitted scores. Green: correct · Red: incorrect. For questions without a uniquely determined answer: Blue: matches prediction · Orange: differs from prediction. These are inferred answer checks, not official per-question grades.
Galaxy
12/12 terminal item results
UDT = user-defined tool: custom code executed by Galaxy. Route badges summarize analysis tools, excluding uploads and automatic conversions. How usage is counted.
Codex GPT-5.5
3 replicates
Codex GPT-5.5
Replicate 1
CorrectUDT-only
Answer37;20;37
WorkflowPBMC SRM MRPS21 counts
- Total tokens
- 229.1K
- Output
- 3.3K
Codex GPT-5.5
Replicate 2
CorrectUDT + standard tools
Answer37;20;37
WorkflowInspect PBMC h5ad for SRM MRPS21 task→Inspect PBMC h5ad SRM MRPS21 v2→Anndata Export→Scanpy Filter→Select columns→2 more tools
- Total tokens
- 5.5M
- Output
- 19.1K
Codex GPT-5.5
Replicate 3
RerunCorrectUDT-only
Answer37;20;37
WorkflowH5AD PBMC diagnostic→PBMC SRM MRPS21 counts
- Total tokens
- 354.8K
- Output
- 4.6K
Codex GPT-5.6 Sol
3 replicates
Codex GPT-5.6 Sol
Replicate 1
CorrectStandard tools only
Answer37;20;37
WorkflowAnndata Export→Scanpy Filter→Add A Column1→Filter rows→Wc Gnu→1 more tools
- Total tokens
- 4.3M
- Output
- 7.6K
Codex GPT-5.6 Sol
Replicate 2
CorrectUDT + standard tools
Answer37;20;37
WorkflowAnndata Inspect→Grep→PBMC SRM versus MRPS21 threshold counts→PBMC target-gene expression source diagnostic
- Total tokens
- 2.3M
- Output
- 11.2K
Codex GPT-5.6 Sol
Replicate 3
CorrectUDT + standard tools
Answer37;20;37
WorkflowAnndata Inspect→Inspect PBMC H5AD metadata and target expression→Compare PBMC X and raw target expression→Final PBMC SRM MRPS21 counts
- Total tokens
- 1.9M
- Output
- 8.7K
Codex + DeepSeek-v4-pro-0813
3 replicates
Codex + DeepSeek-v4-pro-0813
Replicate 1
CorrectStandard tools only
Answer37;20;37
WorkflowScanpy Filter→Anndata Export→Select columns→Add A Column1
- Total tokens
- 4.7M
- Output
- 23.0K
Codex + DeepSeek-v4-pro-0813
Replicate 2
CorrectStandard tools only
Answer37;20;37
WorkflowAnndata Inspect→Scanpy Filter→Anndata Export→Add A Column1→Select columns→1 more tools
- Total tokens
- 8.9M
- Output
- 26.9K
Codex + DeepSeek-v4-pro-0813
Replicate 3
CorrectStandard tools only
Answer37;20;37
WorkflowAnndata Inspect→Anndata Export→Scanpy Filter→Add A Column1
- Total tokens
- 7.3M
- Output
- 18.7K
Codex GPT-5.6 Luna
3 replicates
Codex GPT-5.6 Luna
Replicate 1
CorrectUDT + standard tools
Answer37;20;37
WorkflowAnndata Inspect→Scanpy Filter→h5ad runtime probe→h5ad runtime version probe→h5ad runtime command probe→4 more tools
- Total tokens
- 10.5M
- Output
- 32.3K
Codex GPT-5.6 Luna
Replicate 2
CorrectUDT + standard tools
Answer37;20;37
WorkflowAnndata Export→Filter Tabular→Galaxy UDT→test_tool→Test Tool→4 more tools
- Total tokens
- 20.9M
- Output
- 48.2K
Codex GPT-5.6 Luna
Replicate 3
CorrectUDT + standard tools
Answer37;20;37
WorkflowScanpy Filter→Anndata Export→Filter Tabular→PBMC Scanpy runtime probe→PBMC SRM versus MRPS21 difference counts
- Total tokens
- 5.6M
- Output
- 19.9K