Question
Compute the total non-overlapping exonic length in base pairs for the mouse gene Lepr using the GENCODE mouse release M31 GTF located at https://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_mouse/release_M31/gencode.vM31.annotation.gtf.gz. Output a single non-negative integer.
- Predicted answer
7049Most likely answer for this question; not uniquely determined from submitted scores.
- Domain
- Transcriptomics
- Question style
- Routine Analysis
An answer can be uniquely inferred for 54 of 100 questions from submitted scores. Green: correct · Red: incorrect. For questions without a uniquely determined answer: Blue: matches prediction · Orange: differs from prediction. These are inferred answer checks, not official per-question grades.
Galaxy
12/12 terminal item results
UDT = user-defined tool: custom code executed by Galaxy. Route badges summarize analysis tools, excluding uploads and automatic conversions. How usage is counted.
Codex GPT-5.5
3 replicates
Codex GPT-5.5
Replicate 1
Matches predictionUDT-only
Answer7049
WorkflowLepr exonic length from GENCODE M31
Codex GPT-5.5
Replicate 2
Matches predictionUDT-only
Answer7049
WorkflowLepr GENCODE M31 diagnostic→Lepr GENCODE M31 exonic union length
- Total tokens
- 333.9K
- Output
- 4.2K
Codex GPT-5.5
Replicate 3
Matches predictionUDT + standard tools
Answer7049
WorkflowLepr GTF Diagnostic→Lepr GTF Diagnostic v2→UDT Path Render Probe
- Total tokens
- 3.5M
- Output
- 17.1K
Codex GPT-5.6 Sol
3 replicates
Codex GPT-5.6 Sol
Replicate 1
Matches predictionStandard tools only
Answer7049
WorkflowUpload1→Grep→Gff2Bed1→Bedtools Bed12Tobed6→Bedtools Sortbed→3 more tools
Codex GPT-5.6 Sol
Replicate 2
Matches predictionStandard tools only
Answer7049
WorkflowGrep→Converter Interval To Bed 0→Bedtools Sortbed→Bedtools Mergebed→Gops Basecoverage 1→2 more tools
- Total tokens
- 4.4M
- Output
- 8.2K
Codex GPT-5.6 Sol
Replicate 3
Matches predictionUDT + standard tools
Answer7049
WorkflowGENCODE M31 Lepr exon diagnostic→Bedtools Mergebed→Gops Basecoverage 1→Bedtools Coveragebed→Datamash Ops→1 more tools
- Total tokens
- 16.4M
- Output
- 26.6K
Codex + DeepSeek-v4-pro-0813
3 replicates
Codex + DeepSeek-v4-pro-0813
Replicate 1
Matches predictionStandard tools only
Answer7049
WorkflowConverter Gz To Uncompressed→Gtf Filter By Attribute Values List→Gtftobed12→Bedtools Bed12Tobed6→Bedtools Mergebed→4 more tools
- Total tokens
- 2.2M
- Output
- 15.6K
Codex + DeepSeek-v4-pro-0813
Replicate 2
Matches predictionStandard tools only
Answer7049
WorkflowNo Galaxy tool job recorded
- Total tokens
- 36.9M
- Output
- 93.8K
Codex + DeepSeek-v4-pro-0813
Replicate 3
Matches predictionStandard tools only
Answer7049
WorkflowConverter Gz To Uncompressed→Gff Filter By Attribute→Gff2Bed1→Bedtools Bed12Tobed6→Tp Grep Tool→6 more tools
- Total tokens
- 4.2M
- Output
- 23.8K
Codex GPT-5.6 Luna
3 replicates
Codex GPT-5.6 Luna
Replicate 1
Matches predictionUDT + standard tools
Answer7049
WorkflowConverter Gz To Uncompressed→Tp Grep Tool→Extract Lepr exonic intervals→UDT format probe→UDT runtime probe→6 more tools
- Total tokens
- 13.8M
- Output
- 32.3K
Codex GPT-5.6 Luna
Replicate 2
Matches predictionUDT-only
Answer7049
WorkflowUpload1→Lepr GTF diagnostic→Lepr non-overlapping exonic union→Lepr exonic union independent validation
- Total tokens
- 1.9M
- Output
- 19.3K
Codex GPT-5.6 Luna
Replicate 3
Matches predictionStandard tools only
Answer7049
WorkflowGffread→Gff Filter By Attribute→Gtf Filter By Attribute Values List→Extract Features1→Gtftobed12→5 more tools
- Total tokens
- 5.5M
- Output
- 17.3K