bedtools-chromhmm-q1

Question

We wish to find the chromatin states overlapping the peaks in the given ENCODE narrowpeak bed file ENCFF333TAT.bed.gz. We have a ChromHMM annotation bed file E055_15_coreMarks_dense.bed.gz. What percentage of all bases in the peaks overlap with the 14_ReprPCWk annotation? Ignore bases in the peak file that don't have any corresponding annotation in the annotation file. Round to the nearest integer. Output format: "42".

Predicted answer

16Most likely answer for this question; not uniquely determined from submitted scores.

Domain

Epigenomics

Question style

Routine Analysis

An answer can be uniquely inferred for 54 of 100 questions from submitted scores. Green: correct · Red: incorrect. For questions without a uniquely determined answer: Blue: matches prediction · Orange: differs from prediction. These are inferred answer checks, not official per-question grades.