bix-46-q4 | BixBench Results

Question

What is the log2 fold change value rounded to 2 decimal points for the phenazine pathway gene PA14_35160 in the ΔrhlI mutant?

Ideal answer: -4.10
Category: Sequence Analysis,RNA-seq,Differential Expression Analysis,Transcriptomics

Galaxy-API code with skills

3/3 pass

replicate 1

pass

Answer-4.10

Workflow

rds to tabularFilter1Cut1

Galaxy history Hugging Face trace

replicate 2

pass

Answer-4.10

Workflow

rds to tabularFilter1Cut1Filter1 plus 1 more

Galaxy history Hugging Face trace

replicate 3

pass

Answer-4.10

Workflow

rds to tabular

Galaxy history Hugging Face trace

Galaxy-API code without skills

3/3 pass

replicate 1

pass

Answer-4.10

Workflow

rds to tabulartp grep tool

Galaxy history Hugging Face trace

replicate 2

pass

Answer-4.10

Workflow

rds to tabular

Galaxy history Hugging Face trace

replicate 3

pass

Answer-4.10

Workflow

rds to tabular

Galaxy history Hugging Face trace

Open-ended code with skills

3/3 pass

replicate 1

pass

Answer-4.10

Workflow

local codeDESeq2

No Galaxy historyHugging Face trace

replicate 2

pass

Answer-4.10

Workflow

local codeDESeq2

No Galaxy historyHugging Face trace

replicate 3

pass

Answer-4.10

Workflow

local codeverification note

No Galaxy historyHugging Face trace

Open-ended code without skills

3/3 pass

replicate 1

pass

Answer-4.10

Workflow

local codeverification note

No Galaxy historyHugging Face trace

replicate 2

pass

Answer-4.10

Workflow

local codeverification note

No Galaxy historyHugging Face trace

replicate 3

pass

Answer-4.10

Workflow

local codeverification note

No Galaxy historyHugging Face trace