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BixBench item

bix-35-q1

Question

Calculate the evolutionary rate for the BUSCO gene 156083at2759 using PhyKIT's evoluionary_rate function. What is the gene's evolutionary rate in animals?

Ideal answer
0.0471
Category
['Whole Genome Sequencing (WGS)', 'Genomics', 'Phylogenetics and Evolutionary Analysis']

Galaxy-API code with skills

3/3 pass

Galaxy-API code without skills

3/3 pass

Open-ended code with skills

3/3 pass

replicate 1

pass
Answer0.0471
Workflow
local codeMAFFT
No Galaxy historyHugging Face trace

replicate 2

pass
Answer0.0471
Workflow
local codeMAFFT
No Galaxy historyHugging Face trace

replicate 3

pass
Answer0.0471
Workflow
local codeMAFFT
No Galaxy historyHugging Face trace

Open-ended code without skills

3/3 pass

replicate 1

pass
Answer0.0471
Workflow
local codeMAFFT
No Galaxy historyHugging Face trace

replicate 2

pass
Answer0.0471
Workflow
local codeMAFFT
No Galaxy historyHugging Face trace

replicate 3

pass
Answer0.0471
Workflow
local codeMAFFT
No Galaxy historyHugging Face trace