replicate 1
passAnswer
11
Workflow
rds to tabularFilter1kegg ora
Question
Among significantly upregulated genes in the iron-depleted glucose condition (FeMinus), how many genes contribute to the enrichment of the 'ABC transporters' term after conducting KEGG pathway enrichment analysis? Use an absolute log2 fold change cut off 1.5 and an adjusted p-value threshold of 0.05.
Galaxy-API code with skills
3/3 passreplicate 2
passAnswer
11
Workflow
rds to tabularFilter1kegg ora
replicate 3
passAnswer
11
Workflow
rds to tabularFilter1kegg ora
Galaxy-API code without skills
3/3 passreplicate 1
passAnswer
11
Workflow
rds to tabularFilter1Cut1kegg ora
replicate 2
passAnswer
11
Workflow
rds to tabularFilter1kegg ora
replicate 3
passAnswer
11
Workflow
rds to tabularFilter1kegg ora
Open-ended code with skills
3/3 passreplicate 1
passAnswer
11
Workflow
local codeDESeq2KEGG
replicate 2
passAnswer
11
Workflow
local codeKEGG
replicate 3
passAnswer
11
Workflow
local codeDESeq2KEGG
Open-ended code without skills
3/3 passreplicate 1
passAnswer
11
Workflow
local codeKEGG
replicate 2
passAnswer
11
Workflow
local codeKEGG
replicate 3
passAnswer
11
Workflow
local codeDESeq2KEGG