replicate 1
passAnswer
downregulation
Workflow
DATA FETCHdeseq2Filter1Cut1 plus 2 more
Question
Using differential expression analysis (padj < 0.05, |log2FC| > 0.5) and GO Biological Process enrichment analysis, determine whether upregulation or downregulation of genes primarily drives the metabolic effects of CBD treatment in CRC cells.
Galaxy-API code with skills
3/3 passreplicate 2
passAnswer
downregulation
Workflow
DATA FETCHConvert characters1Cut1deseq2 plus 3 more
replicate 3
passAnswer
downregulation
Workflow
DATA FETCHedgerFilter1Cut1 plus 2 more
Galaxy-API code without skills
3/3 passreplicate 1
passAnswer
downregulation
Workflow
DATA FETCHdeseq2Filter1Cut1 plus 4 more
replicate 2
passAnswer
downregulation
Workflow
DATA FETCHdeseq2Filter1Cut1 plus 4 more
replicate 3
passAnswer
downregulation
Workflow
DATA FETCHunzipdeseq2Filter1 plus 2 more
Open-ended code with skills
3/3 passreplicate 1
passAnswer
Downregulation
Workflow
local codePyDESeq2GOg:Profiler
replicate 2
passAnswer
downregulation
Workflow
local codeedgeRGOg:Profiler
replicate 3
passAnswer
downregulation
Workflow
local codePyDESeq2GO
Open-ended code without skills
3/3 passreplicate 1
passAnswer
downregulation
Workflow
local codePyDESeq2g:Profiler
replicate 2
passAnswer
downregulation
Workflow
local codePyDESeq2GOg:Profiler
replicate 3
passAnswer
downregulation
Workflow
local codePyDESeq2GOg:Profiler