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BixBench item

bix-22-q1

Question

After calculating Pearson correlations between gene length and average gene expression levels for protein-coding genes, in which immune cell type (CD4, CD8, CD14, or CD19) is the correlation the weakest (lowest absolute correlation value)?

Ideal answer
CD14
Category
Sequence Analysis,RNA-seq,Transcriptomics

Galaxy-API code with skills

3/3 pass

Galaxy-API code without skills

2/3 pass

Open-ended code with skills

3/3 pass

replicate 1

pass
AnswerCD14
Workflow
local codeverification note
No Galaxy historyHugging Face trace

replicate 2

pass
AnswerCD14
Workflow
local codeverification note
No Galaxy historyHugging Face trace

replicate 3

pass
AnswerCD14
Workflow
local codeverification note
No Galaxy historyHugging Face trace

Open-ended code without skills

3/3 pass

replicate 1

pass
AnswerCD14
Workflow
local codeverification note
No Galaxy historyHugging Face trace

replicate 2

pass
AnswerCD14
Workflow
local codeverification note
No Galaxy historyHugging Face trace

replicate 3

pass
AnswerCD14
Workflow
local codeverification note
No Galaxy historyHugging Face trace